Config writer

The model needs the configurations file to run (described in previous sections). These configs become lengthy and sometimes difficult to type manually. The config writer helps to generate configs provided the relevant files are present.

These functions are used to print specific sections of the configuration files.

Used to generate the global header. For more information on global headers click HERE.

Used to generate the spatial setup section of the configuration. For more information on spatial setup click HERE.

Used to generate the compartment list for each way a population can be divided.

Parts of the configuration files that are printed but not needed for FlepiMop runs (need to be mentioned for US or COVID-19 specific runs??)

Spatial Setup:

  • census year: year of geodata files

  • modeled states (sim_states): This has US state abbreviations. Do we include the names of the sub-populations in the geodata file? Eg: small_province, large_province

  • state_level: Specifies if the runs are run for US states

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